BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D11LP1|AL428548
(468 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 130 2e-30
>3x_Contig1619
Length = 7770
Score = 130 bits (64), Expect = 2e-30
Identities = 112/128 (87%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 114 ttataagaacgttcaacgactagataatgagttaggttaacaataatttatccacgagtg 173
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1283 ttataaaaacgttcaacgactagataatgagttaggttaacaataatttatccacgagcg 1342
Query: 174 cccaatattagataatattatatattatyhmatamygacatagtctgaacaatatagtaa 233
|||||||| | || | ||||||| | | || ||||||||||||||||||||| ||
Sbjct: 1343 cccaatatcaaat-agattatatttga-----taatgacatagtctgaacaatatagaaa 1396
Query: 234 tatattga 241
||||||||
Sbjct: 1397 tatattga 1404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2978
Number of Sequences: 1807
Number of extensions: 2978
Number of successful extensions: 117
Number of sequences better than 1.0e-20: 1
length of query: 468
length of database: 10,358,551
effective HSP length: 15
effective length of query: 453
effective length of database: 10,331,446
effective search space: 4680145038
effective search space used: 4680145038
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)